Register | Sign In


Understanding through Discussion


EvC Forum active members: 65 (9164 total)
4 online now:
Newest Member: ChatGPT
Post Volume: Total: 916,907 Year: 4,164/9,624 Month: 1,035/974 Week: 362/286 Day: 5/13 Hour: 0/2


Thread  Details

Email This Thread
Newer Topic | Older Topic
  
Author Topic:   MACROevolution vs MICROevolution - what is it?
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


(1)
Message 519 of 908 (817546)
08-18-2017 8:46 AM
Reply to: Message 470 by Faith
08-17-2017 12:46 PM


Re: Breeding possibilities
Faith writes:
To recover from a bottleneck requires the ability to interbreed with others of the same species in order to add genetic diversity,...
There are two goals when helping a species recover from a population bottleneck: 1) Increase the numbers in the population to reduce the threat of extinction and to restore it to healthy maintainable levels; 2) increase the genetic diversity. In the case of the Florida panther there is only the single population in southern Florida. Individuals from other populations cannot be introduced to increase genetic diversity.
...OR depends on getting beneficial mutations that can build up the genetic diversity...
Gaining beneficial mutations is very unlikely on a human timescale except for species with very, very short generational periods, like bacteria.
What I'm talking about is the necessity of losing genetic diversity within a circumscribed new population in order to form a new variety or species from that population,...
New varieties can be created by reduced genetic diversity, but not new species. New breeds would still have all the same genes and alleles as the original population and could still breed with them. They could never be a new species.
--Percy

This message is a reply to:
 Message 470 by Faith, posted 08-17-2017 12:46 PM Faith has replied

Replies to this message:
 Message 520 by Faith, posted 08-18-2017 9:12 AM Percy has replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 537 of 908 (817656)
08-19-2017 8:02 AM
Reply to: Message 520 by Faith
08-18-2017 9:12 AM


Re: Breeding possibilities
Faith writes:
...and mutations don't occur at any rate that would help the situation.
Sure they do, just not usually on an observable human timescale. I did come across information that some Texas pumas were introduced into the Florida Panther population to increase diversity, and that was helpful.
The seals were able to build up their population which is some protection of course, but cats being more loners don't have that advantage.
Elephant seals have one pup per year, while the Florida panther has 2-3 kittens every two years.
There is no reason whatever that a new species would not be the result of many generations of inbreeding in such a population, even to the point of loss of ability to breed with other populations of the same species.
Without mutation, even many generations of inbreeding would create no new genes or alleles. The inbred subpopulation would still possess only genes and alleles already found in the main population. They would be the same species.
--Percy

This message is a reply to:
 Message 520 by Faith, posted 08-18-2017 9:12 AM Faith has replied

Replies to this message:
 Message 540 by Faith, posted 08-19-2017 8:35 AM Percy has replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 538 of 908 (817657)
08-19-2017 8:08 AM
Reply to: Message 528 by DOCJ
08-18-2017 5:47 PM


Re: Evolution has a built-in stopping point
DOCJ writes:
How exactly do you explain time always existing from your pov? Any reason to believe it? How exactly do you explain the wmap? The bb all these scientists support, or are you an electrical universe supporter?
Not a single one of these questions belongs in this topic.
--Percy

This message is a reply to:
 Message 528 by DOCJ, posted 08-18-2017 5:47 PM DOCJ has replied

Replies to this message:
 Message 543 by DOCJ, posted 08-19-2017 10:04 AM Percy has seen this message but not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 541 of 908 (817668)
08-19-2017 9:37 AM
Reply to: Message 540 by Faith
08-19-2017 8:35 AM


Re: Breeding possibilities
Faith writes:
If introducing the Texas puma into the Florida panther population "helped," that means the panther was not completely genetically depleted and was able to breed with the puma,...
Where on Earth did you get the idea that genetic depletion means inability to breed with other members of the same species? The Florida panther is a cougar, and cougars can breed with each other. The various populations of cheetah spread around the world can breed with each other. Because, like, they're the same species and all.
Yes it would possess only the same genes and alleles, but depending on how different the gene frequencies are it could possess strikingly different phenotypic characteristics because of different combinations of those genes/alleles, a different frequency of heterozygosity or homozygosity for different traits and so on. It is the changed gene frequencies that bring about the new characteristics of a new population, and that alone is capable of creating all the different species in a ring species without a single mutation.
You can't get a new species just by manipulating gene frequencies - that just results in new breeds. It's why breeders can't create new species. Only over long time periods are enough mutations produced and distributed to result in the genetic incompatibility that truly defines a new species.
As for mutations, just how often do you get a brand new trait from a mutation anyway?...not much to hang macroevolution on.
A single mutation is microevolution and would be unlikely in the extreme to produce the significant change necessary for speciation. Macroevolution is the accumulation over time of many mutations sufficient to produce new species.
I guess the idea is that the new fur color if selected would make a new species of rabbit.
No one is suggesting or has ever suggested that fur color by itself defines a new species.
--Percy

This message is a reply to:
 Message 540 by Faith, posted 08-19-2017 8:35 AM Faith has replied

Replies to this message:
 Message 542 by Faith, posted 08-19-2017 9:53 AM Percy has replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 600 of 908 (817774)
08-20-2017 8:19 AM
Reply to: Message 542 by Faith
08-19-2017 9:53 AM


Re: Breeding possibilities
Faith writes:
I totally absolutely disagree. All it takes in some species to come to a point where interbreeding is impossible is the loss of genetic diversity through selection over a number of daughter populations.
ABE: This would be the same genetic situation as the cheetah's and the cheetah cannot interbreed with other cats.
That's because cheetahs and other cats are different species. As cheetahs lose habitat to human expansion their numbers are dropping along with their genetic diversity. This loss of genetic diversity is not causing any speciation - in fact, the uniformity of cheetahs is notable.
Nonsense. For one thing mutations are only variations on existing alleles and if new gene frequencies of those existing alleles aren't enough to lead to genetic incompatibility, there's no reason to think a functioning allele brought about by mutation would behave differently.
Of course a mutated allele can behave differently from the original. An allele is a template for a protein. When an allele changes then the protein may change, and when the protein changes it affects the organism.
A mutation is NOT microevolution, it's a single change in a single allele, utterly lost in a population unless selected.
A mutation that is not passed on to the next generation is certainly lost, but there is nothing to prevent its being passed on unless it negatively affects the organism's ability to reproduce.
And a mutation is most certainly microevolution because it affects the gene frequency in the population. The original allele's frequency is less because a new allele now exists.
EVOLUTION REQUIRES SELECTION, requires the proliferation of that mutation at the very least, and OF COURSE speciation isn't going to happen from one mutation.
If an organism reproduces then obviously it was selected. Having a mutation is not a sterilizing event. Humans average around 100 mutations each, and the vast majority of us are not sterile.
And of course speciation isn't going to happen from a single mutation. That's why it's microevolution.
Speciation isn't what I'm focused on but it could happen from extreme reduction of genetic diversity in a whole population with new gene frequencies of alleles whether mutated alleles or not.
And yet, as I said before, breeders are unable to produce new species.
Macroevolution is the accumulation over time of many mutations sufficient to produce new species.
Oh blithering nonsense. This does not happen.
Except that it does. There is nothing that could stop the occurrence of mutations with every reproductive event.
Even if you got all new phenotypes you'd still have the problem of loss of GENETIC diversity due to SELECTION, which is necessary to the formation of new species.
Mere loss of genetic diversity does not create new species. Again, that's why breeders cannot produce new species. Just using selection to remove alleles from a subpopulation leaves the breeder with the same species, albeit a population with characteristics he emphasized. It takes time for the accumulation of sufficient mutations to form a new species.
Selection is necessary to evolution...
Nobody said it wasn't. That you keep thinking nobody grasps this indicates some gaping hole in your understanding of what people are saying.
...and when you have selection you have the replacement of some alleles by the new set of high frequency alleles,...
That's only one of the possibilities. Selection can result in alleles at any frequency level.
always always always the necessary reduction in genetic diversity brought about by selection/evolution.
Speciation by mere reduction in genetic diversity never happens.
I was asking for a picture of what people have in mind when they keep saying mutations can overcome the necessary loss of genetic diversity brought about by selection.
All it takes is for the rate of acceptable mutations to exceed the rate of loss of alleles.
--Percy
Edited by Percy, : No reason given.

This message is a reply to:
 Message 542 by Faith, posted 08-19-2017 9:53 AM Faith has not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 601 of 908 (817776)
08-20-2017 8:40 AM
Reply to: Message 581 by DOCJ
08-19-2017 1:24 PM


Re: the usual silly wrong linear analogy
DOCJ writes:
Ref post 580.
You can create a link to a message by entering "[msg=580]". If you do that then you'll get this link to message 580: Message 580.
By the was, there's a rule in the Forum Guidelines that sort of requests you not compose messages consisting of little more than a link:
  1. Bare links with no supporting discussion should be avoided. Make the argument in your own words and use links as supporting references.
It is also often suggested that you reexplain arguments rather than referencing previous messages that weren't understood the first time they were read.
--Percy

This message is a reply to:
 Message 581 by DOCJ, posted 08-19-2017 1:24 PM DOCJ has replied

Replies to this message:
 Message 606 by DOCJ, posted 08-20-2017 11:19 AM Percy has seen this message but not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 642 of 908 (817898)
08-21-2017 1:30 PM
Reply to: Message 629 by Faith
08-21-2017 11:45 AM


Re: RILs refute your idea of speciation
Faith writes:
I want a term to make it clear I'm talking only about breeding within the new population.
Unless the new population is a family group, "inbreeding" would not be the correct term to use for "breeding within the new population." "Inbreeding" is about mating between closely related individuals.
Mutations I suppose? But as I've already said, why should mutations be genetically incompatible?
They may or may not be... it depends on the mutation. Besides, one single mutation is unlikely to cause genetic incompatibility. It is the accumulation of mutations that would lead to incompatibility.
Well DUH. But the only kind of mutations that should be a problem are the deleterious ones.
The mutations that accumulate over time to form a new species are unlikely to be deleterious, because that would make the population less fit.
And this collection of pedantic irrelevancy contributes what to the discussion?
It's not pedantic or irrelevant. HereBeDragons was responding to your assumption that genetic incompatibility is necessary to produce a new species. He used the example of the ring species Greenish Warblers. Though individuals at opposite ends of the ring may not be genetically incompatible, they may not recognize each other as mates and so are reproductively isolated. Speciation is not solely dependent upon the failure of gametes to fuse.
--Percy

This message is a reply to:
 Message 629 by Faith, posted 08-21-2017 11:45 AM Faith has not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 644 of 908 (817901)
08-21-2017 1:50 PM
Reply to: Message 631 by Faith
08-21-2017 11:55 AM


Re: RILs refute your idea of speciation
Faith writes:
Although I do focus quite a bit on such small populations I claim the same trend exists in larger daughter populations, it just takes more time for the effects to be worked through,
Exactly, and a major point of my example of RIL populations. The effects that you are expecting in daughter populations cannot happen any faster than they can in a population derived from a single parental line, isolated individually and self fertilized for several generations.
It HAS to take more time to blend together the gene frequencies in a larger population than in a smaller population.
HBD was agreeing with you - that's why he began his paragraph with the word "Exactly."
But he went on to explain again the great utility of his RIL example, that it achieves your goal of diminished genetic variation far faster than your daughter population example. And the end result? No speciation.
And I'm sorry but plants with their self-fertilization simply will not do in this discussion. Animals don't self-fertilize.
Some animals self-fertilize, some change sex, some do both.
That breeding strategy operates at the MAXIMUM potential for fixation of alleles and homogenization.
Just another bit of mystification. Maybe your professors would give you high marks but you need a new approach if you are trying to answer my argument.
HBD is just emphasizing in different terms what he just said. The "fixation of alleles" part is about reduced genetic variation, and "homogenization" you already understand because you've been using that term yourself.
If a system that operates at maximum potential for fixation of alleles and homogenization cannot produce new species in 10 generations (98+% homogeneous populations), how could a wild population do it... that is if isolation and changing allele frequencies are enough?
I have no idea what you are talking about.
HBD is explaining why your claim that reduced genetic diversity causes speciation is wrong. The RIL example produces reduced genetic diversity and homogeneity much faster than any breeder (and much, much faster than the wild) could achieve, yet still fails to produce new species.
--Percy

This message is a reply to:
 Message 631 by Faith, posted 08-21-2017 11:55 AM Faith has not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


(1)
Message 646 of 908 (817904)
08-21-2017 1:57 PM
Reply to: Message 635 by herebedragons
08-21-2017 12:03 PM


Re: RILs refute your idea of speciation
Faith is merely employing her time-honored strategy of insult and provocation when discussion doesn't go her way.
I *do* think your RIL example is worth plugging away at. There were a few bits of it that I thought Faith might find challenging, but none it seems like it should be beyond her.
--Percy

This message is a reply to:
 Message 635 by herebedragons, posted 08-21-2017 12:03 PM herebedragons has not replied

Replies to this message:
 Message 647 by Faith, posted 08-21-2017 2:05 PM Percy has replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 651 of 908 (817912)
08-21-2017 2:57 PM
Reply to: Message 645 by Faith
08-21-2017 1:57 PM


Re: RILs refute your idea of speciation
Faith writes:
Mutations occur in individuals.
They can only show up here and there in individuals in a population.
Mutations don't just "show up here and there." Mutations occur in all offspring of all populations. It will be very, very rare when that is not the case.
They will be completely different from each other.
Generally, yes, the mutations each offspring experiences will be different from other offspring. (Though some mutations occur repeatedly, for example, the mutation that causes Down syndrome. The extra copy of chromosome 21 occurs by chance. This is, of course, a deleterious mutation.)
If you got a new phenotype in each individual in a population,...
I don't think you want to trivialize the definition of phenotype to the point where each individual in a population is its own phenotype. If a mutated allele produces a slightly different protein that does pretty much, but not exactly, the same thing as the original protein, is that a new phenotype? If a mutation causes a slightly different blood type, is that a new phenotype? If you begin answering, "Yes, that's a new phenotype," too often to these types of questions then pretty soon you'd have to begin considering a population to have just as many phenotypes as individuals.
...so that you have a scattering of different traits through the entire population, that's not a new species, right?
Right, that's not a new species. A single active mutation cannot cause speciation (polyploid speciation, where the entire chromosome set is duplicated, is a rare exception). A single active mutation will not even usually cause new or different traits. It usually takes an accumulation of active mutations over time to cause changes that are observable by anything other than protein analysis.
What has to happen is selection to spread the mutation or mutations.
Reproduction is what spreads mutations.
Selection is what forms new populations, not mutations.
Selection and mutation are simultaneous processes. Selection decides which individuals contribute their genes to the next generation, and virtually all offspring of every generation have mutations.
...since a new species is also a new population that has different characteristics from the parent population it still can only be formed by replacing those former characteristics with the new ones,...
Yes, agreed so far.
...which is a loss of genetic diversity.
Loss of genetic diversity leaves you with a population that only has genes and alleles already present in the parent population. There is nothing to genetically distinguish them.
For it to remain stable at all would also require that there be no gene flow and no new mutations.
That's true, but in the wild species do not remain stable.
Soon as you get new gene flow, new mutations, drift, a new migration you are losing the homogeneity of your population.
I'm glad you included mutations in your list.
Which is fine except that it's not evolution. Evolution requires selection and selection reduces genetic diversity.
Evolution includes both change (mutation) and selection.
ABE I watched the sunlight go dim out my window. It's bright again. I guess the eclipse is over.
We're in the middle of it here.
--Percy
Edited by Percy, : Grammar.

This message is a reply to:
 Message 645 by Faith, posted 08-21-2017 1:57 PM Faith has not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 653 of 908 (817914)
08-21-2017 3:10 PM
Reply to: Message 647 by Faith
08-21-2017 2:05 PM


Re: RILs refute your idea of speciation
Faith writes:
It isn't a strategy, it's an expression of frustration...
Maybe you should get a stress ball instead of making other people the target of your frustrations.
...at being put through an irrelevant intellectual wringer.
It was very relevant, as has been explained. An RIL strain has extremely little genetic diversity, far less than a daughter population or a breeder could achieve, and yet no matter how many of them you produce you never get a new species.
--Percy

This message is a reply to:
 Message 647 by Faith, posted 08-21-2017 2:05 PM Faith has not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 662 of 908 (817926)
08-21-2017 4:45 PM
Reply to: Message 659 by Faith
08-21-2017 3:31 PM


Re: RILs refute your idea of speciation
Faith writes:
Add all you want, that won't get you a new variety or species. You still have to subtract to get that.
This is just an empty redeclaration of your position, and it is wrong. It is obvious that the species in the world today are genetically distinct, most to the point of reproductive incompatibility. Being genetically distinct from one another is one of the primary observed qualities of existing species. Since adding new genes and alleles to a daughter population would make it genetically distinct, that is what you need to do to create a genetically new species.
A population with reduced genetic diversity would possess all the genes and alleles already present in the parent population. It could never be genetically distinct from the parent population.
--Percy

This message is a reply to:
 Message 659 by Faith, posted 08-21-2017 3:31 PM Faith has not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 663 of 908 (817927)
08-21-2017 4:53 PM
Reply to: Message 660 by Faith
08-21-2017 3:49 PM


Re: RILs refute your idea of speciation
Faith writes:
I'm going to be continuing to watch the videos on population genetics so maybe eventually I can give you some math. But it will be a while.
I think rereading HBD's posts will go a much longer way toward understanding what he is saying than watching population genetics videos, but anyway, which videos are you watching?
Meanwhile you've got a clone in your example? How much genetic variability did you have to lose to get that?
That's the whole point of HBD's RIL example, to eliminate as much genetic variability as possible in as few a number of generations as possible, far faster than breeders or daughter populations in the wild. And yet despite RIL's extreme loss of genetic diversity, no speciation.
--Percy

This message is a reply to:
 Message 660 by Faith, posted 08-21-2017 3:49 PM Faith has replied

Replies to this message:
 Message 666 by Faith, posted 08-21-2017 6:27 PM Percy has replied
 Message 667 by Faith, posted 08-21-2017 6:50 PM Percy has seen this message but not replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 671 of 908 (817938)
08-21-2017 9:07 PM
Reply to: Message 666 by Faith
08-21-2017 6:27 PM


Re: RILs refute your idea of speciation
Faith writes:
I'm coming to the conclusion that nobody knows what brings about speciation,...
You're just repeating your position again, still absent any evidence or argument that can hold water or make sense.
...speciation, defined as inability to breed with...other populations of the same species.
Regarding inability to breed with other populations of the same species, inability to breed is the very definition of different species. If two populations can't interbreed then they're not the same species.
If severe reduction in genetic diversity doesn't, then although I think that must be the actual genetic situation in most supposedly new species, or at least clearly reduced genetic diversity compared to the parent population, something else must bring it about.
Gradually accumulating genetic differences in separated populations is what brings about speciation. This is obvious because genetic distinctness is what defines all the species that exist in the world today. Differing allele frequencies do not define species, different alleles and genes do.
--Percy

This message is a reply to:
 Message 666 by Faith, posted 08-21-2017 6:27 PM Faith has replied

Replies to this message:
 Message 672 by Faith, posted 08-21-2017 11:56 PM Percy has replied

  
Percy
Member
Posts: 22505
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 681 of 908 (817953)
08-22-2017 7:52 AM
Reply to: Message 672 by Faith
08-21-2017 11:56 PM


Re: RILs refute your idea of speciation
Faith writes:
Gradually accumulating genetic differences in separated populations is what brings about speciation.
Right, so how are those genetic differences accumulated? What brings that about?
...So please explain how you think they are accumulated.
Where were you the first 117 times this was explained?
Mutations occur in every generation. Those that are neutral or beneficial are passed on to the next generation, and the next and the next and the next and onward through time. Gradually these mutations accumulate and spread throughout the population. Separated populations of the same species would acquire and accumulate different mutations and gradually become increasingly genetically incompatible.
My argument accounts for a great deal of genetic difference accumulating between separated populations, but the differences I keep saying accumulate don't do it for you.
Your scenario can never reach the point of genetic incompatibility. The daughter population can only possess genes and alleles already genetically compatible with the parent population.
This is obvious because genetic distinctness is what defines all the species that exist in the world today. Differing allele frequencies do not define species, different alleles and genes do.
Different alleles obviously don't or that would be the case in my scenarios.
You can't get different alleles in your scenarios because you allow no role for mutation. In your scenarios a daughter population can only have alleles the parent population already has. And in your scenarios a daughter population can certainly never acquire new genes, and differing genes is the most distinct difference between most species.
Different genes -- where do they come from? Do you have even a shred of evidence of different genes occurring and causing speciation?
New genes are often copying errors, just like new alleles are copying errors. New genes come about in various ways. A new gene may be formed by gene duplication, where a gene is copied twice instead of just once during gamete formation. Or small mutations could create start/stop codons in a previously inactive region of the genome. Or start/stop codons could mutate to something else, resulting in one gene becoming two, or two genes becoming one, or a sequence of previously inactive DNA being added to an existing gene. Lateral gene transfer might introduce a gene from another species. Or viruses might insert a new gene.
If you do, which I strongly doubt, my guess is you're talking about a severely deleterious situation, just another way further evolution becomes impossible and most likely a step on the way to extinction.
Any offspring experiencing a mutation rendering it meaningfully less fit will not likely pass its genes on to the next generation. Selection filters out deleterious alleles and genes before they affect the population.
Gene duplicates are especially easy to detect, and there are many examples. It is estimated that the human lineage has experienced 100 gene duplicates per million years (Origins of New Genes and Pseudogenes). The most familiar example of gene duplication is actually duplication of an entire chromosome with all its genes: Down syndrome. Many plants contain examples of duplication of their entire genomes (polyploid speciation). Ice fish have a gene duplication that provides an antifreeze capability (Gene Duplication), and snakes have a gene duplication that helps provide snake venom (Inventing an arsenal: adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes). The similar MWS/LWS genes in primates arose through gene duplication and provide improved color sensitivity for eyesight (Evolution of colour vision in primates).
--Percy

This message is a reply to:
 Message 672 by Faith, posted 08-21-2017 11:56 PM Faith has not replied

  
Newer Topic | Older Topic
Jump to:


Copyright 2001-2023 by EvC Forum, All Rights Reserved

™ Version 4.2
Innovative software from Qwixotic © 2024