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Author Topic:   Macroevolution: Its all around us...
crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 214 of 306 (218075)
06-19-2005 4:09 PM
Reply to: Message 211 by randman
06-19-2005 3:36 PM


Crash, are you denying that convergent DNA occurs?
I'm denying that it occurs in pseudogenetic sequences, or at least, that it occurs in any greater frequency than we would expect from random chance, in which case I guess it wouldn't really be convergent.
If I can show you that convergent DNA is real, does that mean common descent is not true?
No, of course not. You would have to explain why the false trees established by convergent pseudogenes would match the trees constructed from morphology and stratiography, when in fact they shouldn't match at all.
Your mocking tone suggests it is such an audicious concept to you that you feel it undermines common descent and is tantamount to God playing tricks on people, if true.
If convergent pseudogenes exist to such a degree that they match inferred trees from stratiography and morphology to the precision that we observe, then the only reasonable conclusion is that someone is playing a grand joke with our genetics. There's no other explanation.

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 Message 211 by randman, posted 06-19-2005 3:36 PM randman has not replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 219 of 306 (218146)
06-19-2005 11:31 PM
Reply to: Message 217 by randman
06-19-2005 5:38 PM


EZ, you are still wrong because plant breeding preceded ToE. That fact alone disproves your entire point.
Of course it doesn't. The Indians used asprin for hundreds of years before the white man came. Does that fact disprove the effecacy of modern pharmacology?
The truth is ID and creationism all offer the same insights into plant breeding as you common descenters do.
How does plant breeding make sense in the light of anything but evolution?

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 Message 217 by randman, posted 06-19-2005 5:38 PM randman has not replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 232 of 306 (218770)
06-22-2005 6:34 PM
Reply to: Message 231 by deerbreh
06-22-2005 6:24 PM


I don't claim to be an evolutionary biologist but I have had courses in evolution and I don't ever remember the terms microevolution or macroevolution being used.
You would be right. It's creationist semantic trickery. It would be like saying that the numbers from 0-10 were "micronumbers" and that every number greater than that was a "macronumber", and saying that they were so fundamentally different you couldn't get one from the other.

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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 238 of 306 (218897)
06-23-2005 7:03 AM
Reply to: Message 237 by randman
06-23-2005 2:22 AM


There is evidence of convergent DNA
I guess I don't understand, because I thought the evidence you presented was of convergence between multiple satellite regions across one single genome. How does that apply to, or substantiate, convergence between multiple individual unrelated genomes?

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Replies to this message:
 Message 239 by Wounded King, posted 06-23-2005 7:32 AM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 262 of 306 (219075)
06-23-2005 4:23 PM
Reply to: Message 239 by Wounded King
06-23-2005 7:32 AM


If specific sequences can predispose neighouring regions of sequence to specifc patterns of mutation throughout the human genome there is no reason to believe that similar sequences will not lead to similar patterns in other species.
But between species? How do the specific "seed" sequences get from one species to another? It would seem that you would need genetic information to have passed, at one time, from one species to another; so you're back to two alternatives:
1) Some unknown mechanism of horizontal gene exchange between species.
2) Common descent.
If Randman is trying to explain genetic similarities by recourse to convergence, he has a problem that his model recourses to genetic sequences that convergence can't possibly explain.

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Replies to this message:
 Message 263 by TimChase, posted 06-23-2005 4:38 PM crashfrog has not replied
 Message 264 by pink sasquatch, posted 06-23-2005 4:41 PM crashfrog has replied
 Message 270 by randman, posted 06-23-2005 6:13 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 267 of 306 (219086)
06-23-2005 4:52 PM
Reply to: Message 264 by pink sasquatch
06-23-2005 4:41 PM


Re: ACAC
Oh.
Wait, this is new? How so? I mean, knowing that the most common mutations are the ones that extend repeating sequences, this seems obvious.
How is this "convergent"? I mean there's nothing here that would prevent one species from having, say, 20 repeats of "AC", and another from having 200, right? They don't "converge" on a sequence; if anything, they diverge.

This message is a reply to:
 Message 264 by pink sasquatch, posted 06-23-2005 4:41 PM pink sasquatch has replied

Replies to this message:
 Message 268 by pink sasquatch, posted 06-23-2005 5:05 PM crashfrog has not replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 278 of 306 (219129)
06-23-2005 8:07 PM
Reply to: Message 270 by randman
06-23-2005 6:13 PM


Re: that is illogical
Why is there any necessity of "seed" sequences to get from one species to another.
I would have thought it was obvious.
The paper shows that the "convergence" occurs ajacent to a specific sequence. If you propose that the convergence effect explains genetic similarities between species, then the seed sequence has to already be in the genome of each species whose genetics "converged." (Otherwise, no genetic convergence would have taken place.)
So now you have to explain why multiple, independant, unrelated species each carry this genetic seed; and moreso, the convergence argument can't explain the seed that causes the convergence. you've simply recursed your argument to a segment of DNA that must be shared, and you've left yourself no option to explain that sharing except for 1) an unknown mechanism for horizontal gene exchange; or 2) the very mechanism you started out trying to disprove, common descent.

This message is a reply to:
 Message 270 by randman, posted 06-23-2005 6:13 PM randman has replied

Replies to this message:
 Message 282 by randman, posted 06-23-2005 10:54 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 283 of 306 (219175)
06-23-2005 11:04 PM
Reply to: Message 282 by randman
06-23-2005 10:54 PM


Unless and until you can fully answer that, you have a very incomplete understanding of how genetic sequences emerge, and thus a very poor understanding of how genetic evidence may or may not be evidence for common ancestry.
I don't see how that's the case.
I posit it is reasonable to assume that all sequences have predispositions towards a certain pattern.
I don't see how that's the case, either. If all sequences have such a predisposition, then why are sequences so different across the board?
The seed sequence can arise independently
And what are the odds of that occuring across thousands of unrelated species?
and if the study's implications are correct, and certain sequences are predisposed to mutate along a certain pattern
But according to the study that only happens in the presence of very specific sequences that already have to be there.
So you haven't answered my question. How do those first sequences arise? Do you really expect us to believe that it happened, across many thousands of species, entirely by coincidence in such a way as to match phylogenies derived from independant stratiography?
How stupid do you think we are, exactly?
Actually, evolutionists already claim that species can evolve to just about any sequence.
We've already established that there's no selection pressure for these seed sequences, or for any pseudogenetic sequence of the type used for molecular phylogenics.
You have to keep in mind if parts of DNA are predisposed to mutate according to a certain pattern, and new patterns once they emerge all have a predisposition, then claiming that it is unlikely for there to be high degrees of convergent evolution of DNA due to it being statistically unlikely is faulty logic.
And you have to keep in mind that assuming that "it's predisposed to happen", and then saying "and then it did happen, which proves the whole thing true", is circular logic.
You are assuming mutations only occur by chance, but in fact they may well occur according to a pattern, an embedded design, perhaps governed by the chemical properties of the local environment.
Mutations need not be driven by chance for Darwinism to be true. They need simply be undetermined by environment.

This message is a reply to:
 Message 282 by randman, posted 06-23-2005 10:54 PM randman has replied

Replies to this message:
 Message 286 by randman, posted 06-24-2005 1:42 AM crashfrog has replied
 Message 287 by randman, posted 06-24-2005 1:51 AM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 291 of 306 (219242)
06-24-2005 7:38 AM
Reply to: Message 286 by randman
06-24-2005 1:42 AM


Different sequences have different predispositions.
Then there's no such thing as convergence, if DNA is predisposed to be divergent. You've undercut your position once again.
Why the thousands of unrelated species argument? That's totally bogus since no one brought up thousands of unrelated species.
You brought it up. That's your position, is it not? That the hundreds of thousands - possibly millions or billions - of different species are not the result of common descent from one species, right?
If they're not related, then they're unrelated. Simple logic. Try to keep up with your own position, ok?
I'd say pretty good odds since if certain sequences or aspects of combinations of DNA tend to start it off in a similar direction, that is a common causal effect that can produce a repitition in pattern.
No, you still don't get it yet. You have to explain how all those different genomes wound up with the starter sequences. This convergence effect cannot do that, because the convergence effect requires certain pre-existing patterns. So how did those patterns start multiple times in independant, unrelated species?
Personally, I prefer to look at the evidence. I don't see mutations as random, and it appears DNA is convergent.
But it's clearly not, which you yourself have admitted:
quote:
Different sequences have different predispositions.
By the way, phylogenies from morphologists often do not agree with phylogenies from molecular systemists. You are just, once again, relying on overstatement to bolster a weak case. Why not just admit that there is some disagreement?
When have I not admitted that? Of course there would be some disagreement. The problem for you is that there is considerably - astronomically - more agreement than we would expect from chance alone, or if DNA was simply "converging" on one single pattern. Certainly more than we would expect if DNA was diverging into thousands of different predispositions.
Why should we accept the coincidence that animals flapping their appendages to eat flies would one day mutate fully adaptive wings?
What are the odds for that coincidence?
What's conincidental about it?
Convergent DNA shows there is another reason why pseudogenetic sequences can arise independently in different species
But your convergent model is incomplete. The convergence can only occur between two species if they already share certain specific sequences, and you have no mechanism to explain why that would be the case. Why would chimps and humans share non-morphological DNA?
But there are partly determined in all likelihood by the local environment.
This is simply not the case. We observe that mutations almost always arise in populations before they're selected for by the environment.
Or are you telling me that DNA can see the future?

This message is a reply to:
 Message 286 by randman, posted 06-24-2005 1:42 AM randman has not replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 292 of 306 (219245)
06-24-2005 7:40 AM
Reply to: Message 287 by randman
06-24-2005 1:51 AM


Re: microsatellites do occur in coding DNA
Do you guys have any evidence suggesting there are no convergent tendencies in coding DNA?
If there were, all DNA would have converged on the same sequence by now. There would only be one species.
Instead, there are billions. Thus, we know that the vast majority of DNA is shaped by the forces of Darwinism, not by pre-programmed convergence.

This message is a reply to:
 Message 287 by randman, posted 06-24-2005 1:51 AM randman has replied

Replies to this message:
 Message 297 by randman, posted 06-24-2005 3:17 PM crashfrog has not replied

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