Sorry about not replying to your earlier post sooner, my typing tends to be as speedy as a sloth on tranqs, so I don't tend to post very much
But it probably also works under a principle of conservation. Differential methlyation of a non-expressed, non-coding piece of junk DNA is probably tolerable for an organism. But screw up methylation or acetlyation of the Xist locus and it causes major problems.
I think this is quite a useful definition to work with. If the amount of non-sequence modification doesn't matter (as in proper 'junk' DNA sections), then it doesn't have to be thought about in relation to evolution/inheritance.
If the amount of modification is vital for the gene to function properly then it can be treated for all intents and purposes like a Mendalian allele (but maybe with a little more potential to 'fine-tune' a phenotype). Whether it compliments or antagonises the traditional sequence 'genotype' or not doesn't matter - it is at least 'pseudo-Mendalian'. I think I'm with PS on this one - trying to assign traits to a genome where genes are interacting like crazy is flipping complicated.
However, if there are a number of methlylation states which can all be influenced by the environment, and can all give rise to viable (yet differing) phenotypes then the waters can get a bit murky IMO. I agree with an earlier comment of yours: hopefully the Evo-Devo side of things can start to clear things up a bit.
Edits: an attempt to make sense
This message has been edited by Ooook!, 10-26-2004 11:31 AM
This message has been edited by Ooook!, 10-26-2004 12:08 PM