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Author Topic:   Some mutations sound too good to be true
PaulK
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Posts: 17828
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Member Rating: 2.3


Message 226 of 301 (246702)
09-27-2005 11:14 AM
Reply to: Message 224 by Faith
09-27-2005 10:52 AM


Re: beneficial and big
Recombination generally only reshuffles genes. That can't increase genetic diversity at all. The diversity is measured by the number of variants of a given gene (the alleles) so it really does require that the genes change over time.

This message is a reply to:
 Message 224 by Faith, posted 09-27-2005 10:52 AM Faith has replied

Replies to this message:
 Message 229 by Faith, posted 09-27-2005 11:26 AM PaulK has replied
 Message 233 by Faith, posted 09-27-2005 11:41 AM PaulK has replied

Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 227 of 301 (246703)
09-27-2005 11:21 AM
Reply to: Message 225 by jar
09-27-2005 10:59 AM


Re: beneficial and big
...and observably increasing the viability of the species?
You need to remember that viability is not related to mutations. Viability is determined by the second part of the process, Natural Selection.
What mutations do do, and the real strength of the random factor, is introduce variability.
Well, this is problematic it seems to me, as natural selection reduces genetic variability, which is what the species is trying to recover from in this example, as this condition of low diversity ultimately strands it on the brink of extinction. (That's the problem with all the "processes of evolution" -- and bottleneck and natural selection are listed among them -- that most of them tend to reduce genetic variability which reduces the variations available to be selected.
So now we're talking about a population that finds itself out there in a condition of extremely low diversity because of a severe bottleneck, and the question is how can it recover from this condition as it is not conducive to further variation or selection. If breeding with another population of the same kind is not possible then mutation is all there is available to increase variability, and at this point it is this increase, not selection, that is desired.
Hence the question, has it actually been observed that by mutation alone, genetic variability has been increased in a bottlenecked population, and therefore its viability also increased (rescue from the brink of extinction)?

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 Message 225 by jar, posted 09-27-2005 10:59 AM jar has replied

Replies to this message:
 Message 228 by jar, posted 09-27-2005 11:24 AM Faith has replied
 Message 263 by Graculus, posted 09-27-2005 7:16 PM Faith has replied

jar
Member (Idle past 423 days)
Posts: 34026
From: Texas!!
Joined: 04-20-2004


Message 228 of 301 (246704)
09-27-2005 11:24 AM
Reply to: Message 227 by Faith
09-27-2005 11:21 AM


Re: beneficial and big
Random mutation will increase variability by definition.
AbE:
There is no other mechanism to increase variability than mutation.
This message has been edited by jar, 09-27-2005 10:27 AM

Aslan is not a Tame Lion

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 Message 227 by Faith, posted 09-27-2005 11:21 AM Faith has replied

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 Message 231 by Faith, posted 09-27-2005 11:31 AM jar has replied

Faith 
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Posts: 35298
From: Nevada, USA
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Message 229 of 301 (246705)
09-27-2005 11:26 AM
Reply to: Message 226 by PaulK
09-27-2005 11:14 AM


Re: beneficial and big
Recombination generally only reshuffles genes. That can't increase genetic diversity at all. The diversity is measured by the number of variants of a given gene (the alleles) so it really does require that the genes change over time.
But doesn't recombination (re)introduce variants to a population in which variants have been severely reduced? That is, a bottlenecked population may have NO variants for particular genes, but variants may be reintroduced by breeding with another population that has them.

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 Message 226 by PaulK, posted 09-27-2005 11:14 AM PaulK has replied

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 Message 236 by PaulK, posted 09-27-2005 11:44 AM Faith has replied

Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 230 of 301 (246706)
09-27-2005 11:27 AM
Reply to: Message 228 by jar
09-27-2005 11:24 AM


Re: beneficial and big
Random mutation will increase variability by definition.
Yes, by definition, but the question is about observation, not definition.

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 Message 228 by jar, posted 09-27-2005 11:24 AM jar has not replied

Faith 
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From: Nevada, USA
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Message 231 of 301 (246707)
09-27-2005 11:31 AM
Reply to: Message 228 by jar
09-27-2005 11:24 AM


Re: beneficial and big
There is no other mechanism to increase variability than mutation.
Well, I only brought up recombination because I understood it to be a possibility and it has to be ruled out if we're going to focus only on what mutations actually do.
So now whether in fact mutation has been observed to increase variability is the important question.

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 Message 228 by jar, posted 09-27-2005 11:24 AM jar has replied

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 Message 234 by jar, posted 09-27-2005 11:41 AM Faith has replied

Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 232 of 301 (246708)
09-27-2005 11:34 AM
Reply to: Message 223 by Graculus
09-27-2005 9:13 AM


Does mutation actually increase variability?
You are claiming that mutation alone increases genetic variability but only over great great periods of time -- in 10,000 years it has not rescued the cheetah, and you consider 10,000 years to be a small period of time, or recent. And yet you also say that each human child has 100 mutations that its parents don't have, which suggests a very high increase in genetic variability being introduced in each generation. I would think 10,000 years would produce enough generations to restore genetic variability to the cheetah if that is really how it occurs.
This message has been edited by Faith, 09-27-2005 11:39 AM

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
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Message 233 of 301 (246711)
09-27-2005 11:41 AM
Reply to: Message 226 by PaulK
09-27-2005 11:14 AM


Number of variants of given gene
The diversity is measured by the number of variants of a given gene (the alleles) so it really does require that the genes change over time.
How many variants of a given gene can there be in a population?
This message has been edited by Faith, 09-27-2005 11:41 AM

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 Message 237 by PaulK, posted 09-27-2005 11:47 AM Faith has replied

jar
Member (Idle past 423 days)
Posts: 34026
From: Texas!!
Joined: 04-20-2004


Message 234 of 301 (246712)
09-27-2005 11:41 AM
Reply to: Message 231 by Faith
09-27-2005 11:31 AM


mutation and variability
So now whether in fact mutation has been observed to increase variability is the important question.
It is impossible for mutation to NOT increase variability. If two things are identical and you change one, then there is increased variability.

Aslan is not a Tame Lion

This message is a reply to:
 Message 231 by Faith, posted 09-27-2005 11:31 AM Faith has replied

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 235 of 301 (246713)
09-27-2005 11:44 AM
Reply to: Message 234 by jar
09-27-2005 11:41 AM


Re: mutation and variability
It is impossible for mutation to NOT increase variability. If two things are identical and you change one, then there is increased variability.
Unless the change is deleterious or produces disease. That's a kind of variability but we have to be talking about VIABLE variability don't we? This is why I'm asking if a severely bottlenecked population has ever been OBSERVED to recover by mutation alone from its condition of severely reduced genetic variability.

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 Message 234 by jar, posted 09-27-2005 11:41 AM jar has replied

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 Message 238 by jar, posted 09-27-2005 11:49 AM Faith has not replied
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PaulK
Member
Posts: 17828
Joined: 01-10-2003
Member Rating: 2.3


Message 236 of 301 (246714)
09-27-2005 11:44 AM
Reply to: Message 229 by Faith
09-27-2005 11:26 AM


Re: beneficial and big
1) If we consider the genetic variation within a species rather than a local population the sort of recombination you suggest cannot occur (ignoring hybridisation which can occur between some species).
2) The main bottleneck in the cheetah population is beleived to be a single pregnant female. There are no other populations.
3) Likewise in the Bible story of the Flood the inhabitants of the ark are supposed to be the sole survivors - again there are not other populations to consider. The effective human population under the usual interpretation, then, would be 5. "Unclean" species would be reduced to 2 individuals - a situation nearly as bad as the cheetah bottleneck (and even worse under some YEC interpretations, where multiple species would be descended from a mere 2 individuals living 4500 years ago).

This message is a reply to:
 Message 229 by Faith, posted 09-27-2005 11:26 AM Faith has replied

Replies to this message:
 Message 239 by Faith, posted 09-27-2005 11:52 AM PaulK has replied

PaulK
Member
Posts: 17828
Joined: 01-10-2003
Member Rating: 2.3


Message 237 of 301 (246715)
09-27-2005 11:47 AM
Reply to: Message 233 by Faith
09-27-2005 11:41 AM


Re: Number of variants of given gene
In a diploid species there can be an absolute maximum of two variants of a gene per individual.

This message is a reply to:
 Message 233 by Faith, posted 09-27-2005 11:41 AM Faith has replied

Replies to this message:
 Message 240 by Faith, posted 09-27-2005 11:53 AM PaulK has replied

jar
Member (Idle past 423 days)
Posts: 34026
From: Texas!!
Joined: 04-20-2004


Message 238 of 301 (246716)
09-27-2005 11:49 AM
Reply to: Message 235 by Faith
09-27-2005 11:44 AM


Re: mutation and variability
That's a kind of variability but we have to be talking about VIABLE variability don't we?
No, of course not. Mutation has nothing to do with viability. Viability is determined by Natural Selection.
Whether something is viable or not depends on the environment it lives in. If something lives long enough to reproduce it suceeded. If it lives long enough to reproduce more than one critter, then the population expands. But that is a function of the filtering process.

Aslan is not a Tame Lion

This message is a reply to:
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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 239 of 301 (246718)
09-27-2005 11:52 AM
Reply to: Message 236 by PaulK
09-27-2005 11:44 AM


Re: beneficial and big
1) If we consider the genetic variation within a species rather than a local population the sort of recombination you suggest cannot occur (ignoring hybridisation which can occur between some species).
We've been talking about bottlenecked populations, and in some cases there are other populations of the same species from which the bottlenecked group has become isolated, with which breeding is still possible. But I'd rather focus on mutation alone as the mechanism for increasing genetic variability. I merely mentioned recombination as the only other way a bottlenecked population might recover genetic diversity.
2) The main bottleneck in the cheetah population is beleived to be a single pregnant female. There are no other populations.
Yes, which is why it is dependent on mutation alone to increase its genetic variability. But in 10,000 years, according to Graculous, this hasn't occurred.
3) Likewise in the Bible story of the Flood the inhabitants of the ark are supposed to be the sole survivors - again there are not other populations to consider. The effective human population under the usual interpretation, then, would be 5. "Unclean" species would be reduced to 2 individuals - a situation nearly as bad as the cheetah bottleneck (and even worse under some YEC interpretations, where multiple species would be descended from a mere 2 individuals living 4500 years ago).
This is why YECs have to postulate a greater inbuilt genetic diversity in these few than we normally see these days. More genes for one trait for instance.
This message has been edited by Faith, 09-27-2005 11:55 AM

This message is a reply to:
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 Message 241 by PaulK, posted 09-27-2005 11:59 AM Faith has replied
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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 240 of 301 (246719)
09-27-2005 11:53 AM
Reply to: Message 237 by PaulK
09-27-2005 11:47 AM


Re: Number of variants of given gene
In a diploid species there can be an absolute maximum of two variants of a gene per individual.
And how many per population?
This message has been edited by Faith, 09-27-2005 11:53 AM

This message is a reply to:
 Message 237 by PaulK, posted 09-27-2005 11:47 AM PaulK has replied

Replies to this message:
 Message 242 by PaulK, posted 09-27-2005 12:01 PM Faith has replied

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