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Author | Topic: Thermodynamics, Abiogenesis and Evolution | |||||||||||||||||||||||||||
berberry Inactive Member |
rineholdr's title, not mine. This is a spinoff of 'The Big Bang - Questions from a Teen' in the 'Big Bang and Cosmology' forum.
rineholr wrote:
quote: and I responded:
quote: The earlier topic is straying from the original intent of the thread, therefore I'm proposing we move the discussion here.
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DNAunion Inactive Member |
The second law of thermodynamics poses no problem at all for evolution: abiogenesis is a different story. Why?
Because for existing life - and therefore evolution - we can give a full account of how energy enters organisms and how it is then used to maintain the high degree of order of the organism, and to even increase the organism's complexity (same goes for higher levels, such as populations, communities, etc.). But we can't yet give such an explanation for the origin of life (we don't even know what the very first life could have actually been). Until some prebiotically plausible mechanism for capturing and channeling the available prebiotic energy into performing useful "biological" work is found, vague appeals to "open systems" just aren't sufficient ("open system thermodynamics" are necessary, but not sufficient). [This message has been edited by DNAunion, 04-12-2004]
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berberry Inactive Member |
DNAunion writes:
quote: I didn't realize we had moved so quickly from evolution to abiogenesis. I'm making no claims regarding abiogenesis. Until your 'prebiotically plausible mechanism' is discovered it seems pointless to argue whether abiogenesis conflicts with the 2nd law. I'm not sure I understand why you brought this point up. I thought the discussion was about evolution and the 2nd law. If I missed something somewhere I'm sorry.
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RAZD Member (Idle past 1578 days) Posts: 20714 From: the other end of the sidewalk Joined: |
Your title is the reason - "and the origin of life"
on a molecular level reactions occur that either give off energy or need energy to complete. in a balanced system one reaction could give off energy that is used by another reaction to fuel it's completion. the earth is not a balanced system however, as it receives energy from the sun and from impacts of meteors and similar bodies (one theory is that the moon is a remnant of a major collision). with energy available there is no inherent problem for abiogenesis from the second law of thermodynamics. we are limited in our ability to understand by our ability to understand RebelAAmerican.Zen[Deist
{{{Buddha walks off laughing with joy}}}
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JonF Member (Idle past 341 days) Posts: 6174 Joined: |
Until some prebiotically plausible mechanism for capturing and channeling the available prebiotic energy into performing useful "biological" work is found, vague appeals to "open systems" just aren't sufficient ("open system thermodynamics" are necessary, but not sufficient). Er, you appear to have a serious misunderstanding of thermodynamics. The second law deals with entropy, and entropy is a property; that's a technical term that means its value depends only on the current state of the system and not in any way how the system got to that state. (This is often very useful, because it means that we can calculate entropy changes between two states along any possible and equivalent path). Therefore the idea of needing to know a mechanism (for the transition between states) in order to evaluate the thermodynamic possibilities is a red herring. What counts thermodynamically is the difference in entropy between the initial and final states, not how it got from one state to the other. I think that some people have done such calculations for some proposed scenarios, but I'm not sure. However, what I am sure of is that you can't claim that the second law of thermodynamics poses any problem for any hypothesized event until you have calculated the change in entropy and demonstrated a spontaneous decrease. Nor can you claim that particular characteristics of a system are or are not necessary, or are or are not sufficient, until you have presented the appropriate calculations. Of course, we are trying to figure out mechanisms for all sorts fo reasons; but we do not need to know a mechanism to evaluate what thermodynamics allows.
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berberry Inactive Member |
AbbyLeever writes:
quote: Oh, yeah, I should've noticed that. Actually that title was copied from a subtitle in the earlier thread, it isn't mine. It is misleading, though; I wish I'd changed it.
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AdminAsgara Administrator (Idle past 2475 days) Posts: 2073 From: The Universe Joined: |
What would you like it to be called berberry?
{Note from Adminnemooseus - It was also started in the "Origins of Life" forum. Personally, I kind of like the concept of a thermodynamics/abiogenesis topic. Anyhow, to me, message 1 is pretty vague about what you intended the topic to be. That said, I'll let AdminAsgara handle any title changes and moves} [This message has been edited by Adminnemooseus, 04-12-2004] AdminAsgara Queen of the Universe
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berberry Inactive Member |
How about 'Thermodynamics, Abiogenesis and Evolution', since that seems to cover all the bases?
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AdminAsgara Administrator (Idle past 2475 days) Posts: 2073 From: The Universe Joined: |
Your wish is my command oh squirrelly one
AdminAsgara Queen of the Universe
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mike the wiz Member (Idle past 167 days) Posts: 4755 From: u.k Joined: |
I see you have answered one request. But it will be hard to answer everyones, now you know the diffculty with the unbeliever.
[This message has been edited by mike the wiz, 04-12-2004]
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DNAunion Inactive Member |
quote: quote: No, you appear to have a serious misunderstanding of bioenergetics.
quote: Yeah, so what? You’re confused. You see, I am not talking about only thermodynamics: I am talking about thermodynamics as it applies to the origin of life — more than one field of science is involved here. Explaining how life could arise from nonlife requires explaining the mechanism by which a decrease in entropy - associated with the formation of biological polymers and systems of such polymers - could have plausibly occurred in a prebiotic context. Simply saying sufficient energy was available because the Earth is an open system is insufficient.
quote: No red herring...you're just confused.
quote: And what counts in explaining the origin of life is explaining how things got from one state to another! This particular discussion does involve the origin of life...remember: it’s not about some simple thermodynamic process like a cup of hot tea cooling off.
quote: And I’d disagree. For example, we know that the change from free monomers to polymers involves a decrease in entropy (increase in order) and is endergonic (which is why OOL researchers preactivate their monomers). And we know this without having to know exact values. So polymer formation goes in the wrong direction and is thus a nonspontaneous process. Therefore, some sort of process or mechanism must be present in order for such an uphill process to occur (for example, cells couple endergonic reactions with exergonic reactions, usually using ATP as an energy intermediate). What was the prebiotic mechanism? Simply saying that sufficient energy was present is not a sufficient explanation. It's like trying to explain translation in extant cells by simply saying that cells have ATP at their disposal: insufficient explanation. Worse yet, even having sufficient ATP in a cell won't produce proteins if ribosomes - the cellular "machine" that makes proteins - are absent. So relying on just vauge appeals to "open system thermodynamics" for translation is insufficient in more than one way - same goes for OOL. [This message has been edited by DNAunion, 04-12-2004]
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berberry Inactive Member |
DNAunion writes:
quote: Insufficient for what? You keep repeating this, and I would agree that to the purpose of explaining abiogenesis certainly it's insufficient. But is that your whole point? That seems too obvious. Are you saying that abiogenesis could not have happened because it is made impossible by the 2nd law? If so, how do you suppose life began on earth? You seem to know a good deal more about this subject than I do, so please don't think I'm challenging you. I'm simply trying to be sure I understand you.
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JonF Member (Idle past 341 days) Posts: 6174 Joined: |
JohnF: The second law deals with entropy, and entropy is a property; that's a technical term that means its value depends only on the current state of the system and not in any way how the system got to that state.
Yeah, so what? You’re confused. You see, I am not talking about only thermodynamics: I am talking about thermodynamics as it applies to the origin of life — more than one field of science is involved here. It doesn't matter how many fields of science you are talking about, it doesn't matter if you are talking about thermodynamics as it applies to the origin of life or as it applies to steam power plants or as it applies to anything at all. Entropy is a property and its value depends only on the current state of the system and not in any way how the system got to that state. Until you realize and accept that your thermodynamic claims are gobbledygook.
Explaining how life could arise from nonlife requires explaining the mechanism by which a decrease in entropy - associated with the formation of biological polymers and systems of such polymers - could have plausibly occurred in a prebiotic context. From the point of view of thermodynamics, absolutely not. If you wish to claim (as you have) that there is a thermodynamic problem with abiogenesis, the only way you can support that statement is with calculations that demonstrate an overall decrease in entropy. Of course, from the point of view of abiogenesis research, explaining the mechanism is key ... but we're not discussing that, we're discussing your claim of a thermodynamic problem.
Simply saying sufficient energy was available because the Earth is an open system is insufficient. Agreed, but irrelevant to your claim of a thermodynamic problem. In the absence of calculations we don't know if there is a thermodynamic problem. As I said in my earlier message, I think such caclulations have been made for some scenarios; but the relevant item is your claim that there is a problem. Simply saying that it hasn't been proved that there is no problem is insufficient; you claimed there is a problem, support that claim.
For example, we know that the change from free monomers to polymers involves a decrease in entropy (increase in order) and is endergonic (which is why OOL researchers preactivate their monomers). And we know this without having to know exact values. So polymer formation goes in the wrong direction and is thus a nonspontaneous process. Therefore, some sort of process or mechanism must be present in order for such an uphill process to occur (for example, cells couple endergonic reactions with exergonic reactions, usually using ATP as an energy intermediate). Agreed. However, in order to determine the thermodynamics of the situation we do not have to have the slightest idea of what that process is or was. All we have to know is the starting state of an appropriate system and the ending state of that same system. It may be convenient to calculate the changes by integrating along a process path from the initial to the final state, but it is not required to do so, and that process path can be any physically possible path; it need not be the actual path and it can be a ludicrously unrealistic path.
So relying on just vauge appeals to "open system thermodynamics" for translation is insufficient in more than one way - same goes for OOL. True; but appeals to open system thermodynamics do demonstrate that it's plausible that there may not be a problem. However, it's still irrelevant to your claim that the second law of thermodynamics poses a problem for abiogenesis. You need to supply positive support for that claim, not just vague appeals to a supposed lack of support for other's claims.
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DNAunion Inactive Member |
quote: quote: No, that is not my point. Let me try an analogy. We see an antenna on the top of the Empire State building. Getting it up there is an uphill process and won't occur spontaneously. There's no problem explaining it though because we know how cranes, elevators, motors, etc. were used to get it up there (this is analogous to how cells make their uphill processes work today). But what about the pyramids? There were no cranes, elevators, motors, etc. so we can't use them to explain how the top blocks got up there - gravity poses a problem for the origin of pyramids (analogous to how the second law poses a problem for OOL). It is insufficient to say simply that there was sufficient free energy - volcanoes, wind storms, sunlight, etc.: that fails as an explanation for how the top blocks got up there. What is needed is some plausible, "pretechnology" mechanism that would allow those blocks to get up there and that is what several teams have attempted to explain. **********************************PS: Please note that my use of a pyramid analogy does not mean I am saying that intelligence was required for OOL.
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NosyNed Member Posts: 9011 From: Canada Joined: |
I just want to toss my 2 cents (Canadian so really, really small) in here.
DNA has a clear point. The free energy is available but there must be some mechanism for allowing it to perform the work. That is all he is saying and it is the basic issue of abilogenesis. We don't know the mechanism. For example, it is perfectly fine to point out the sunlight makes the earth an open system. But without the mechanism of photosynthesis we still don't get life working. Now DNA, the discussion was thermodynamics and you did confuse the topic by bringing in something else.
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