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Author Topic:   Logos = Universal Algorithm
Chimp
Inactive Member


Message 1 of 39 (96977)
04-02-2004 2:45 AM


Here is the definition of "algorithm":
Algorithm - Wikipedia
quote:
"Algorithm
From Wikipedia, the free encyclopedia.
Broadly-defined, an algorithm is an interpretable, finite set of instructions for dealing with contingencies and accomplishing some task which can be anything that has a recognizable end-state, end-point, or result for all inputs. (contrast with heuristic). Algorithms often have steps that repeat (iterate) or require decisions (logic and comparison) until the task is completed."

DNA is an algorithm, a finite set of instructions, which can construct a carbon based life form.
The life form physically contains the DNA and the DNA contains the life form in an "abstract" sense.
At a fundamental level of existence, it is postulated that "nature" could be constructed of tiny strings, and those strings, loops, or branes, could even be constructed of string "bits".
These bits could encode information, analogous to the universe's "DNA"? A set of instructions built into the fabric of space/time and mass/energy?
quote:
"If, then, it is true that the axiomatic basis of theoretical physics cannot be extracted from experience but must be freely invented, can we ever hope to find the right way? I answer without hesitation that there is, in my opinion, a right way, and that we are capable of finding it. I hold it true that pure thought can grasp reality, as the ancients dreamed." (Albert Einstein, 1954)


Replies to this message:
 Message 2 by crashfrog, posted 04-02-2004 2:47 AM Chimp has replied
 Message 3 by Adminnemooseus, posted 04-02-2004 3:03 AM Chimp has not replied
 Message 23 by kofh2u, posted 04-11-2004 9:07 AM Chimp has not replied
 Message 39 by Brad McFall, posted 04-22-2004 7:08 PM Chimp has not replied

  
crashfrog
Member (Idle past 1488 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 2 of 39 (96978)
04-02-2004 2:47 AM
Reply to: Message 1 by Chimp
04-02-2004 2:45 AM


DNA is an algorithm, a finite set of instructions
There are no instructions in DNA. All DNA does is catalyze the formation of proteins. It's just chemistry. It's not a computer.
There's no more "instructions" in DNA then there are "instructions" in a water molecule for the formation of ice.

This message is a reply to:
 Message 1 by Chimp, posted 04-02-2004 2:45 AM Chimp has replied

Replies to this message:
 Message 4 by Chimp, posted 04-02-2004 4:03 AM crashfrog has replied
 Message 5 by RAZD, posted 04-02-2004 10:20 AM crashfrog has not replied
 Message 38 by Brad McFall, posted 04-22-2004 6:57 PM crashfrog has not replied

  
Adminnemooseus
Administrator
Posts: 3974
Joined: 09-26-2002


Message 3 of 39 (96982)
04-02-2004 3:03 AM
Reply to: Message 1 by Chimp
04-02-2004 2:45 AM


Official warning to Chimp
Chimp, don't forget your God = Greatest Common Factor topic.
You also have started other topics, under a previous ID (A forum violation, which I will, at least for now, let you get away with).
I don't want to see you starting ANY more topics for a while.
Adminnemooseus

This message is a reply to:
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Chimp
Inactive Member


Message 4 of 39 (96987)
04-02-2004 4:03 AM
Reply to: Message 2 by crashfrog
04-02-2004 2:47 AM


http://www.bimcore.emory.edu/...Mrobbin/project/protdna.html
quote:

DNA contains the instructions of life. It is through DNA that the organism grows and is maintained. By itself, DNA is nothing but a code. For DNA to serve a purpose, the code must be used. Proteins are the method by which DNA is used. All known of this information is fairly simplistic. The more puzzling question is how do protein and DNA work together? How is it that a protein can recognize a sequence of about 20 bases in the midst of millions of bases? What regulates these interactions? This tutorial will attempt to explain some of the mechanisms of Protein-DNA interactions.

Page not found - Black Hawk College
Edward O. Wilson on The Biological Basis of Morality - The Atlantic
quote:

Each kind of animal is furthermore guided through its life cycle by unique and often elaborate sets of instinctual algorithms, many of which are beginning to yield to genetic and neurobiological analyses. With all these examples before us, we may reasonably conclude that human behavior originated the same way.

http://seqcore.brcf.med.umich.edu/doc/educ/dnapr/pg1.html
quote:

DNA is basically a long molecule that contains coded instructions for the cells. Everything the cells do is coded somehow in DNA...

Crash frog's opinion appears to be incorrect?

This message is a reply to:
 Message 2 by crashfrog, posted 04-02-2004 2:47 AM crashfrog has replied

Replies to this message:
 Message 6 by RAZD, posted 04-02-2004 10:23 AM Chimp has not replied
 Message 7 by crashfrog, posted 04-02-2004 12:31 PM Chimp has replied

  
RAZD
Member (Idle past 1426 days)
Posts: 20714
From: the other end of the sidewalk
Joined: 03-14-2004


Message 5 of 39 (97018)
04-02-2004 10:20 AM
Reply to: Message 2 by crashfrog
04-02-2004 2:47 AM


analogy
Crash
It's just chemistry. It's not a computer.
The computer is not the algorithm -- the program in the computer "cell" is the algorithm.
The old computers (I know you will like this ... ah the old days with whole air-conditioned rooms dedicated to banks of machines assembled into one computer) used punch cards to encode instructions and they had to be stacked "just so" and have no errors for the program to produce the desired results. Mistakes on the cards or shuffling some cards caused problems. Many times the program would crash (die) but sometimes it would appear to give the desired answer with some hidden error in it.
However, I do have trouble with extending that analogy to the {cosmic realm and string theory and quantum mechanics} to imply a design process.
You can look at DNA (or RNA) sequences and say {this section can build protein "X" under these conditions, while this section can build protein "Q" under these (different) conditions}. There is no such link known for quantum mechanics into the macro-universe.
There is also no "universe-cell" structure ... (sorry) ... to "interpret" the information in assembling bits and pieces into stars, planets, galaxies, etc.
A stack of punched cards without the computer "cell" to interpret them are just landfill.
DNA (or RNA) without a (biological) cell is just an organic molecule.

we are limited in our ability to understand
by our ability to understand
RebelAAmerican.Zen[Deist
{{{Buddha walks off laughing with joy}}}

This message is a reply to:
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RAZD
Member (Idle past 1426 days)
Posts: 20714
From: the other end of the sidewalk
Joined: 03-14-2004


Message 6 of 39 (97019)
04-02-2004 10:23 AM
Reply to: Message 4 by Chimp
04-02-2004 4:03 AM


not that your's on the cosmic information is rendered correct thereby.
you and DNAUnion should have an interesting discussion.
Enjoy.

we are limited in our ability to understand
by our ability to understand
RebelAAmerican.Zen[Deist
{{{Buddha walks off laughing with joy}}}

This message is a reply to:
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crashfrog
Member (Idle past 1488 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 7 of 39 (97052)
04-02-2004 12:31 PM
Reply to: Message 4 by Chimp
04-02-2004 4:03 AM


Crash frog's opinion appears to be incorrect?
Any statement that DNA includes "instructions" is an analogy only. It's just as accurate to say that DNA is just chemistry, because it is.
It's fairly useful to consider cretain sequences of nucleotides as "instructions", but that's just an analogy, and it's inappropriate to go from that to a statement that DNA has real instructions in it.

This message is a reply to:
 Message 4 by Chimp, posted 04-02-2004 4:03 AM Chimp has replied

Replies to this message:
 Message 8 by DNAunion, posted 04-02-2004 7:50 PM crashfrog has replied
 Message 14 by Chimp, posted 04-03-2004 3:29 AM crashfrog has not replied

  
DNAunion
Inactive Member


Message 8 of 39 (97297)
04-02-2004 7:50 PM
Reply to: Message 7 by crashfrog
04-02-2004 12:31 PM


Can you name one thing that does contain instructions?
[This message has been edited by DNAunion, 04-02-2004]

This message is a reply to:
 Message 7 by crashfrog, posted 04-02-2004 12:31 PM crashfrog has replied

Replies to this message:
 Message 9 by Loudmouth, posted 04-02-2004 8:06 PM DNAunion has replied
 Message 11 by crashfrog, posted 04-02-2004 10:05 PM DNAunion has replied

  
Loudmouth
Inactive Member


Message 9 of 39 (97301)
04-02-2004 8:06 PM
Reply to: Message 8 by DNAunion
04-02-2004 7:50 PM


quote:
Can you name one thing that does contain instructions?
Condom wrappers.
In a sense, no. Every atom seems to have its own "instruction set" or rules to follow no different than DNA within a cell. I can't think of an easy way to separate out the instructions in an atom from the instructions in DNA.
PS. This is all starting to sound a little too familiar.

This message is a reply to:
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Replies to this message:
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DNAunion
Inactive Member


Message 10 of 39 (97323)
04-02-2004 8:59 PM
Reply to: Message 9 by Loudmouth
04-02-2004 8:06 PM


So nothing contains instructions? Or a single atom contains instructions? Either position is kind of extreme (and foolish?), don't you think.
[This message has been edited by DNAunion, 04-02-2004]

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crashfrog
Member (Idle past 1488 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 11 of 39 (97364)
04-02-2004 10:05 PM
Reply to: Message 8 by DNAunion
04-02-2004 7:50 PM


Can you name one thing that does contain instructions?
The manual to my VCR?

This message is a reply to:
 Message 8 by DNAunion, posted 04-02-2004 7:50 PM DNAunion has replied

Replies to this message:
 Message 12 by DNAunion, posted 04-02-2004 11:47 PM crashfrog has replied

  
DNAunion
Inactive Member


Message 12 of 39 (97381)
04-02-2004 11:47 PM
Reply to: Message 11 by crashfrog
04-02-2004 10:05 PM


No, that's just ink.

This message is a reply to:
 Message 11 by crashfrog, posted 04-02-2004 10:05 PM crashfrog has replied

Replies to this message:
 Message 13 by crashfrog, posted 04-03-2004 12:40 AM DNAunion has replied
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crashfrog
Member (Idle past 1488 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 13 of 39 (97399)
04-03-2004 12:40 AM
Reply to: Message 12 by DNAunion
04-02-2004 11:47 PM


No, the manual contains instructions, and here's how I know:
It was the intent of the writers of the manual to include instructions (this I know from the definition of "manual"); and, as a speaker of English, I can verify personally that the arrangement of text explains to me how to program the VCR.
Now, the manual doesn't program the VCR for me, and neither does it compel me to program it.
Instructions are messages from one person to another that explain how do accomplish a task in steps. If there's "instructions" in DNA, then who put them there?

This message is a reply to:
 Message 12 by DNAunion, posted 04-02-2004 11:47 PM DNAunion has replied

Replies to this message:
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Chimp
Inactive Member


Message 14 of 39 (97425)
04-03-2004 3:29 AM
Reply to: Message 7 by crashfrog
04-02-2004 12:31 PM


http://www.blc.arizona.edu/...e/DNA_Tutorial.HTML#Components
quote:

DNA is a polymer. The monomer units of DNA are nucleotides, and the polymer is known as a "polynucleotide." Each nucleotide consists of a 5-carbon sugar (deoxyribose), a nitrogen containing base attached to the sugar, and a phosphate group. There are four different types of nucleotides found in DNA, differing only in the nitrogenous base. The four nucleotides are given one letter abbreviations as shorthand for the four bases.
A is for adenine
G is for guanine
C is for cytosine
T is for thymine

AGCT looks like code to me... DNA? = information?
Physicist Stephen Hawking writes:
quote:

DNA is the basis of all life on Earth. It has a double helix structure, like a spiral staircase...
[...]
There are four bases in DNA: adenine, guuanine, thymine, and cytosene. The order in which they occur along the spiral staircase carries the genetic information that enables the DNA to assemble an organism around it and reproduce itself...

At the most fundamental length scales, the fundamental paticles, called "strings", could be constructed of even more basic units i.e. bits? analogous to a computer code?
1010100010...etc.
Universal algorithms?
This assumption seems to hint for a designed universe, or even stranger still, a universe that is a type of life form...???
[This message has been edited by Chimp, 04-03-2004]

This message is a reply to:
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Chimp
Inactive Member


Message 15 of 39 (97426)
04-03-2004 3:38 AM
Reply to: Message 12 by DNAunion
04-02-2004 11:47 PM


quote:

DNAunion wrote:
No, that's just ink.

Excellent point DNAunion.
Yes, frogs can't have their cake and eat it too...

This message is a reply to:
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Replies to this message:
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