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Author Topic:   ID, Information, and Human Perception
Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 3 of 49 (92553)
03-15-2004 10:32 AM
Reply to: Message 2 by Loudmouth
03-10-2004 3:35 PM


Information within science
The complexity of large sets of non-redundant protein sequences is measured. This is done by estimating the Shannon entropy as well as applying compression algorithms to estimate the algorithmic complexity. The estimators are also applied to randomly generated surrogates of the protein data. Our results show that proteins are fairly close to random sequences. The entropy reduction due to correlations is only about 1%. However, precise estimations of the entropy of the source are not possible due to finite sample effects. Compression algorithms also indicate that the redundancy is in the order of 1%. These results confirm the idea that protein sequences can be regarded as slightly edited random strings. We discuss secondary structure and low-complexity regions as causes of the redundancy observed. The findings are related to numerical and biochemical experiments with random polypeptides. Copyright 2000 Academic Press.
So, if information isn't something that really exists. Would you mind to explain me the terms (and why these scientist use them?):
  • complexity
  • non-redundant
  • measured
  • estimating
  • entropy
  • compression
  • randomly
  • surrogates
  • reduction
  • correlations
  • (secundary) structure
Thanks

This message is a reply to:
 Message 2 by Loudmouth, posted 03-10-2004 3:35 PM Loudmouth has not replied

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 Message 4 by Yaro, posted 03-15-2004 11:03 AM Saviourmachine has replied

  
Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 5 of 49 (92565)
03-15-2004 11:05 AM
Reply to: Message 1 by Yaro
03-10-2004 1:40 PM


Yaro writes:
In another thread I brought up Alphabet soup. If I were eating alphabet soup, and the letters floated around and spelled out the word, I dunno, "Jesus", that would be a perfect example of an ireducably complex system, and new informataion coming from nothing.
Some remarks about the assumed similarities between alphabet and DNA soup:
  • even if there is one-to-one relationship between DNA and the to be decoded protein, between 'Jesus' and the concept Jesus there isn't
  • there is no direct causal relationship between letters and the word they form, you are using a spoon or something like that? (with your eyes closed, I assume)
  • how do you simulate natural selection? how many words do you form without meaning?
  • it's your knowledge of english that translates Jesus as indicating some person a long time ago (in Dutch for example it's misspelled: Jezus)
  • how do you know it's irreducable complex?
    1. maybe a long time ago Jesu did mean something, and esu, and su ('his' in Spanish) and u ('you' in Dutch)
    2. maybe it had some other function in the past
But in truth that bird is no different from the rock. Just another asemblage of matter.
...
I think IDers are mistakeing human assigned "meaning" for reality. If we were not here to intepret it would this "information", or "ireducible complexity", exist at all?
Blending and particulate systems [Abler, 1989], a lot of water molecules give water properties that differ from any of their constituents.
There are several reasons to suggest that there are different types of realities. This doesn't mean that there have to be non-fysical realities, but that there are 'levels of reality' to discern. Even Churchland differs an auto-connected way of knowing from a hetero-connected way (first person versus third person view). But, he fails to point out why consciousness not can be considered as a separate reality. Seperate realities in the way a particulate system has.

This message is a reply to:
 Message 1 by Yaro, posted 03-10-2004 1:40 PM Yaro has replied

Replies to this message:
 Message 7 by Yaro, posted 03-15-2004 11:15 AM Saviourmachine has replied

  
Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 6 of 49 (92568)
03-15-2004 11:15 AM
Reply to: Message 4 by Yaro
03-15-2004 11:03 AM


Re: Information within science
I think the root of the problem lies in the "information" idea. ID'ers seem to find something special in the concept of information, DNA as information, and so on. But what they don't seem to understand is that we identify this information as stuff that is meaningfull to us, as humans!
So, information is identified by the meaningfullness to us.
I was saying that ID'ers are confusing information for human assigned "meaning". They are different things all together.
So, information and meaning are totally different concepts.
Can you explain me this? Maybe a definition of 'information' and of 'meaning' would help.

This message is a reply to:
 Message 4 by Yaro, posted 03-15-2004 11:03 AM Yaro has replied

Replies to this message:
 Message 8 by Yaro, posted 03-15-2004 11:28 AM Saviourmachine has replied

  
Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 9 of 49 (92573)
03-15-2004 11:32 AM
Reply to: Message 7 by Yaro
03-15-2004 11:15 AM


Yes there is, the alphabet soup word relates to a human imposed concept, as does the DNA "word".
Which Jesus are you talking about? If there is a one-to-one relationship I've to have the same person in mind I guess.
Okay, I got it. A DNA 'word' is a human imposed concept, genes are a concept, proteins are a concept.
But I guess you could say, natural selection is pasta which is able to float. Because not all of them can.
Inapproriate comparision, natural selection has to do with the 'concepts' genes and proteins.
Again, the meaning is irrelivant. It makes no difference if the word is "whakhj" or "jesus". The meaning if imposed by humans.
Genes and proteins as meanings?

This message is a reply to:
 Message 7 by Yaro, posted 03-15-2004 11:15 AM Yaro has replied

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Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 10 of 49 (92577)
03-15-2004 12:01 PM
Reply to: Message 8 by Yaro
03-15-2004 11:28 AM


Information, is stuff like DNA. I suppose in it's simplest definition, some form of stored data.
...
Everything potentialy has information in it given the right interpreter.
Are you saying that information exists, even without an interpreter?
meaningfull information
You can divide information in meaningfull information and information without meaning. Maybe it's nice to differ 'probability or embarrassment' versus 'accordancy with reality'. The reason why I shouldn't opt for the latter is that it hollows out the concept of information. There is no way to capture 'structure' within such a definition. Do you think there exists something like 'structure'?

This message is a reply to:
 Message 8 by Yaro, posted 03-15-2004 11:28 AM Yaro has replied

Replies to this message:
 Message 11 by Yaro, posted 03-15-2004 12:20 PM Saviourmachine has replied

  
Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 13 of 49 (92593)
03-15-2004 1:30 PM
Reply to: Message 11 by Yaro
03-15-2004 12:20 PM


Structure a product of interpreted information
Yaro writes:
Information necessitates an interpreter, or else it is not information.
So, information as ordinary data arrays, but called information in the appearance of an interpreter.
Saviourmachine writes:
You can divide information in meaningfull information and information without meaning. Maybe it's nice to differ 'probability or embarrassment' versus 'accordancy with reality'.
The first option takes a particular point of view into account, it assumes a possibility to embarras the spectator. In compression techniques information is defined according prediction chance. A picture with random black and white spots contains the greatest amount of information.
Yaro writes:
Perhapse, I am that natural selection. Choosing words that only mean something to me.
That's a better suggestion.


If the aim with your analogy was to stress the difference between 'meaning' and 'information' like you defined them, then I want to suggest to leave it by this.
If the aim with you analogy was to stress the similarity between 'information' in alphabet and DNA soup, then you've to explain why the structure involved is a product of interpreted information in both cases.

This message is a reply to:
 Message 11 by Yaro, posted 03-15-2004 12:20 PM Yaro has replied

Replies to this message:
 Message 14 by Yaro, posted 03-15-2004 2:50 PM Saviourmachine has replied

  
Saviourmachine
Member (Idle past 3584 days)
Posts: 113
From: Holland
Joined: 01-16-2004


Message 29 of 49 (92941)
03-17-2004 3:31 PM
Reply to: Message 14 by Yaro
03-15-2004 2:50 PM


The existence of information
Yaro writes:
I think we showld look further back than DNA soup even, lets go as far back as the elemnts. As all matter is an arangement of them.
Well, alphabet soup, ocasionaly produces words we understand. However, this word production does not mean all the other things aren't words also. After all, it is humans which give more meaning to a letter arangement such as "Jesus" as uposed to "ahskdhuw".
Structure
DNA is a sort of data stack, okay. But it's data with structure and so it's not data an sich. Arrangements of matter is matter that's structured, not matter an sich. To say that it's pure matter, or that in truth everything is just matter isn't addressing the problem. There is a difference between unorganized data and organized data.
Hierarchy and recursivity
Systems have a sort of hierarchy. There are operators that aren't functioning on the lower or the upper levels. Here our human viewpoint can decieve us, because we can't see every level at once.
Structure from which parts can reused as sub-structures are recursive, a typical example is human language. That's something that every intellect would notice, don't you think so?
Holism
And what I already mentioned, summed up in the popular phrase: "the whole is greater than the sum of its parts".
Self-organization
Of course, organized data doesn't will organize spontaneously. There has to be at least some self-organizing organism behind it. Maybe you think I want to let you say that there have to be ID because of the observed hierarchy. But, that's a little bit too fast. First we've to examine how the mechanism of self-organization did become part of our universe.


The existence of information
What I want to stress is that there is structure and self-organizing even without human observers. I regard self-organizing as a kind of probing, a primitive kind of observing. To assign the term information to that particular data set is a small step by then.
  • Self-organization -> probing -> observing -> interpreting -> information
    Links:
    It's a scientif challenge: "Towards a theory of everything?" pdf html

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     Message 14 by Yaro, posted 03-15-2004 2:50 PM Yaro has replied

    Replies to this message:
     Message 30 by Yaro, posted 03-17-2004 4:05 PM Saviourmachine has replied
     Message 31 by Loudmouth, posted 03-17-2004 4:27 PM Saviourmachine has replied
     Message 42 by Peter, posted 04-22-2004 4:00 AM Saviourmachine has replied

      
    Saviourmachine
    Member (Idle past 3584 days)
    Posts: 113
    From: Holland
    Joined: 01-16-2004


    Message 33 of 49 (93481)
    03-20-2004 5:53 AM
    Reply to: Message 30 by Yaro
    03-17-2004 4:05 PM


    DNA is intrinsically special
    It's not my point to prove ID.
    It was only to disprove the reasoning:
  • no information with no human perception
  • ID is exclusively related with information
    -> so, no ID without human perception

    Yaro writes:
    What would you consider unorganized data? ... Could you show an example of disorganized data?
    Random data. Radioactive decay.
    Everything in this universe is potential data, and can be viewd as organized in some context.
    Everything is usable as data. Our organization of it isn't just a random process. It's reflecting the organization of the structures in the outward world itself.
    I see nothing intrinsicaly special about DNA. Could you explain further?
    It's self-organizing, DNA is indeed intrinsically special.
  • Self-organization -> probing -> observing -> interpreting -> information
    Yes, but recursivity does not necessitate intellect. For example, if you go out to arizona you see these crazy rock formations. Alot of them are incredibly complex structures.
    ...
    So you see, the stone relied on simpler sub-structures, to produce even more comples structures. Yet this process involved no intelect.
    I was in Uyuni and saw this arbol de piedra (the photo isn't mine by the way). They are indeed incredible. But I don't see the recursivity you mentioned, the stone doesn't show hierarchy.

    It seems you and I are thinking the same about being able to prove or disprove ID in the context of information. Let us argue about the way information is part of our universe (not about the Originator).
    I want to stress that if I'm speaking about organized it doesn't have to mean that there is a Organizer, if I'm speaking about information it doesn't have to mean that there is a Perciever, if I'm speaking about structure it doesn't have to mean that there is Somebody 'Who did it'.

    I don't know if you will understand this, but you're treating human perception as something special. I can see it as a product of a self-organizing process that exists in the universe. It's an extension of the same process that accounts for crystal formation.. Although, if it is like that, then we've to explain why there occur such phase-shifts like the ability of reasoning and the appearance of self-awareness.

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    Saviourmachine
    Member (Idle past 3584 days)
    Posts: 113
    From: Holland
    Joined: 01-16-2004


    Message 34 of 49 (93482)
    03-20-2004 5:58 AM
    Reply to: Message 32 by TechnoCore
    03-18-2004 6:34 AM


    Love
    The goal is to make others happy, others, also God.

    This message is a reply to:
     Message 32 by TechnoCore, posted 03-18-2004 6:34 AM TechnoCore has replied

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    Saviourmachine
    Member (Idle past 3584 days)
    Posts: 113
    From: Holland
    Joined: 01-16-2004


    Message 35 of 49 (93483)
    03-20-2004 6:13 AM
    Reply to: Message 31 by Loudmouth
    03-17-2004 4:27 PM


    The existence of self-organization
    Loudmouth writes:
    This type of information is different than information created by intelligence. For example, it is not the composition of the ink (chemical) that matters, but rather the abstract forms of the ink stain. In cells, the "chemical makeup of the ink" does matter, with DNA being the ink.
    The outcome, the phenotype, the abstract form, does matter too. Natural selection doesn't select on the genome directly.
    A cell can only probe, observe, and interpret within the guidelines set out within it's DNA. If A happens, B HAS to happen. There is no decision making process.
    And natural selection? And humans? What's so special about a decision making process?

    The big question is: How does self-organization arise? (Even for crystal formation.)

    This message is a reply to:
     Message 31 by Loudmouth, posted 03-17-2004 4:27 PM Loudmouth has not replied

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    Saviourmachine
    Member (Idle past 3584 days)
    Posts: 113
    From: Holland
    Joined: 01-16-2004


    Message 37 of 49 (93846)
    03-22-2004 11:45 AM
    Reply to: Message 36 by TechnoCore
    03-20-2004 12:06 PM


    Re: Love
    To be happy is fun.
    Why?
    Because it's the same (to be happy = fun).
    Why?
    The proposition (x=x)=true is a valid reasoning.
    Why?
    Because I feel happy with using this kind of reasoning.
    Why?
    Because it's kind of fun.
    Why?
    (see above)

    The ability to have always a next question, doesn't lead to no answer at all. There is an answer, a circular one. And maybe the only possibility to become sure is revelation.

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     Message 36 by TechnoCore, posted 03-20-2004 12:06 PM TechnoCore has replied

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    Saviourmachine
    Member (Idle past 3584 days)
    Posts: 113
    From: Holland
    Joined: 01-16-2004


    Message 43 of 49 (105843)
    05-06-2004 7:07 AM
    Reply to: Message 42 by Peter
    04-22-2004 4:00 AM


    Re: The existence of information
    It [DNA] can be viewed AS data, but has no syntax (any sequence is possible)... The organisation is a human perception super-imposed over the chemical found in almost all known cells.
    The organisation doesn't exist only as a human perception. The 'perceptor' here is nature itself. It's data processing resulting in something nature can percieve. For example: time is typical something that human experience, but it's also something inherently existing in the real world even without us. DNA does even have semantics, not any sequence is valid, just as human writings.

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